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Work published with BioMed Central in the last 12 months by researchers at University College Cork
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Research article
Participation in everyday activities and quality of life in pre-teenage children living with cerebral palsy in South West Ireland Mc Manus V, Corcoran P, Perry IJ BMC Pediatrics 2008, 8 :50 (31 October 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Enhancing bile tolerance improves survival and persistence of Bifidobacterium and Lactococcus in the murine gastrointestinal tract Watson D, Sleator RD, Hill C, Gahan CGM BMC Microbiology 2008, 8 :176 (9 October 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Motility is required for the competitive fitness of entomopathogenic Photorhabdus luminescens during insect infection Easom CA, Clarke DJ BMC Microbiology 2008, 8 :168 (3 October 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Discovery of frameshifting in Alphavirus 6K resolves a 20-year enigma Firth AE, Chung BYW, Fleeton MN, Atkins JF Virology Journal 2008, 5 :108 (26 September 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Development of a luciferase-based reporter system to monitor Bifidobacterium breve UCC2003 persistence in mice Cronin M, Sleator RD, Hill C, Fitzgerald GF, van Sinderen D BMC Microbiology 2008, 8 :161 (24 September 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Separation of Hepatitis C genotype 4a into IgG-depleted and IgG-enriched fractions reveals a unique quasispecies profile Moreau I, O'Sullivan H, Murray C, Levis J, Crosbie O, Kenny-Walsh E, Fanning LJ Virology Journal 2008, 5 :103 (23 September 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Review
Marine metagenomics: strategies for the discovery of novel enzymes with biotechnological applications from marine environments Kennedy J, Marchesi JR, Dobson ADW Microbial Cell Factories 2008, 7 :27 (21 August 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Nisin inducible production of listeriolysin O in Lactococcus lactis NZ9000 Bahey-El-Din M, Griffin BT, Gahan CGM Microbial Cell Factories 2008, 7 :24 (29 July 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Case Report
Takayasu's Arteritis presenting as a dissecting aortic aneurysm history: a case report O'Connor MB, Murphy E, O'Donovan N, Murphy M, Phelan MJ, Regan MJ Cases Journal 2008, 1 :52 (21 July 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Correlation between pre-treatment quasispecies complexity and treatment outcome in chronic HCV genotype 3a Moreau I, Levis J, Crosbie O, Kenny-Walsh E, Fanning LJ Virology Journal 2008, 5 :78 (9 July 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Metastatic susceptibility locus, an 8p hot-spot for tumour progression disrupted in colorectal liver metastases: 13 candidate genes examined at the DNA, mRNA and protein level Macartney-Coxson DP, Hood KA, Shi H, Ward T, Wiles A, O'Connor R, Hall DA, Lea RA, Royds JA, Stubbs RS, Rooker S BMC Cancer 2008, 8 :187 (1 July 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Molecular analysis of the emergence of pandemic Vibrio parahaemolyticus Boyd EF, Cohen ALV, Naughton LM, Ussery DW, Binnewies TT, Stine OC, Parent MA BMC Microbiology 2008, 8 :110 (30 June 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Intraoperative frozen section assessment of sentinel lymph nodes in the operative management of women with symptomatic breast cancer Ali R, Hanly AM, Naughton P, Castineira CF, Landers R, Cahill RA, Watson RG World Journal of Surgical Oncology 2008, 6 :69 (26 June 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Methodology article
Development of multiple strain competitive index assays for Listeria monocytogenes using pIMC; a new site-specific integrative vector Monk IR, Casey PG, Cronin M, Gahan CGM, Hill C BMC Microbiology 2008, 8 :96 (13 June 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The cumulative effect of core lifestyle behaviours on the prevalence of hypertension and dyslipidemia Villegas R, Kearney PM, Perry IJ BMC Public Health 2008, 8 :210 (13 June 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [1 comment ]
Research article
Genome-wide survey of allele-specific splicing in humans Nembaware V, Lupindo B, Schouest K, Spillane C, Scheffler K, Seoighe C BMC Genomics 2008, 9 :265 (2 June 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Short report
Bioinformatic analysis suggests that the Cypovirus 1 major core protein cistron harbours an overlapping gene Firth AE, Atkins JF Virology Journal 2008, 5 :62 (20 May 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Human methanogen diversity and incidence in healthy and diseased colonic groups using mcrA gene analysis Scanlan PD, Shanahan F, Marchesi JR BMC Microbiology 2008, 8 :79 (20 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Multilocus analysis of introgression between two sand fly vectors of leishmaniasis Mazzoni CJ, Araki AS, Ferreira GEM, Azevedo RVDM, Barbujani G, Peixoto AA BMC Evolutionary Biology 2008, 8 :141 (12 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A Salzberg SL, Sommer DD, Schatz MC, Phillippy AM, Rabinowicz PD, Tsuge S, Furutani A, Ochiai H, Delcher AL, Kelley D, Madupu R, Puiu D, Radune D, Shumway M, Trapnell C, Aparna G, Jha G, Pandey A, Patil PB, Ishihara H, Meyer DF, Szurek B, Verdier V, Koebnik R, Dow JM, Ryan RP, Hirata H, Tsuyumu S, Won Lee S, Ronald PC, Sonti RV, Van Sluys MA, Leach JE, White FF, Bogdanove AJ BMC Genomics 2008, 9 :204 (1 May 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants Crossman LC, Gould VC, Dow JM, Vernikos GS, Okazaki A, Sebaihia M, Saunders D, Arrowsmith C, Carver T, Peters N, Adlem E, Kerhornou A, Lord A, Murphy L, Seeger K, Squares R, Rutter S, Quail MA, Rajandream MA, Harris D, Churcher C, Bentley SD, Parkhill J, Thomson NR, Avison MB Genome Biology 2008, 9 :R74 (17 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Bioinformatic analysis suggests that the Orbivirus VP6 cistron encodes an overlapping gene Firth AE Virology Journal 2008, 5 :48 (14 April 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Software
Ornithine decarboxylase antizyme finder (OAF): Fast and reliable detection of antizymes with frameshifts in mRNAs Bekaert M, Ivanov IP, Atkins JF, Baranov PV BMC Bioinformatics 2008, 9 :178 (2 April 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Neighbourhood perceptions of physical activity: a qualitative study Burgoyne LN, Woods C, Coleman R, Perry IJ BMC Public Health 2008, 8 :101 (28 March 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The prevalence of self-reported deliberate self harm in Irish adolescents Morey C, Corcoran P, Arensman E, Perry IJ BMC Public Health 2008, 8 :79 (28 February 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Supervised Lowess normalization of comparative genome hybridization data van Hijum SAFT, Baerends RJS, Zomer AL, Karsens HA, Martin-Requena V, Trelles O, Kok J, Kuipers OP BMC Bioinformatics 2008, 9 :93 (11 February 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Methodology
HBVRegDB: Annotation, comparison, detection and visualization of regulatory elements in hepatitis B virus sequences Panjaworayan N, Roessner SK, Firth AE, Brown CM Virology Journal 2007, 4 :136 (17 December 2007) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Case report
Hematochezia in a patient with liver cirrhosis Cahill RA, Norris S, Stephens RB World Journal of Emergency Surgery 2007, 2 :32 (4 December 2007) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Case report
Postoperative phlegmasia caerulea dolens: a case report and consideration of potential iatrogenic factors Cahill RA, Redmond HP Journal of Medical Case Reports 2007, 1 :163 (1 December 2007) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
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application to lactococcal strain comparisons