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Call for papers - Second dive into marine genomics

Guest Editors

J. Antonio Baeza, PhD, Clemson University, USA
Artem Nedoluzhko, PhD, European University at Saint Petersburg, Russia

Submission Status: Open   |   Submission Deadline: 10 July 2025 

Natural disasters causing mass extinctions have been common throughout Earth's history. Today, human-driven global changes are impacting the planet, with the ocean bearing the effects of rising temperatures and acidification. These shifts are transforming marine landscapes and biodiversity. BMC Genomics invites researchers to contribute to our Collection Second dive into marine genomics, focusing on ocean biodiversity and evolution using molecular genetics, genomics, and bioinformatics.

New Content ItemThis Collection supports and amplifies research related to SDG 14: Life Below Water.

Meet the Guest Editors

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J. Antonio Baeza, PhD, Clemson University, USA

Dr Baeza is interested in various topics in the fields of Evolutionary Biology, Molecular Phylogenetics, Genomics, and Fisheries Biology. He uses marine and terrestrial vertebrates and invertebrates, including economically valuable species, as model systems. His research is both hypothesis and curiosity driven, and he uses a combination of genomic tools, molecular phylogenies, natural history observations, basic modeling approaches, and manipulative experiments to accomplish his research goals. His current research programs have two main focuses (1) non-applied research on the behavioral ecology and evolutionary biology of marine invertebrates in order to understand diversification processes (2) applied research aimed at generating information relevant for proposing measures for the conservation and sustainable use of exploited marine vertebrates and invertebrates. The model systems he is using include bats, sharks, and crustaceans, among others.

Artem Nedoluzhko, PhD, European University at Saint Petersburg, Russia

Artem Nedoluzhko is the Head of the Paleogenomics laboratory at the European University at Saint Petersburg. He has extensive research experience in the area of evolutionary genomics of vertebrates (i.e., aquatic animals). He studied Biology at the Far Eastern Federal University (FEFU) and obtained his PhD in Biotechnology from the Federal Research Center of Biotechnology of the Russian Academy of Science in 2008. His research is focused on the evolutionary genomics of vertebrates, including using museum and ancient DNA. Dr Nedoluzhko is a member of the editorial board of BMC Genomics.

About the Collection

The last century has seen a large and rapid expansion of human activities which in turn has been destroying ecosystems that had been developing for billions of years. Indeed, growing economic activities often lead to the extinction of species, the degradation of habitats, and the direct destruction of organic life. Human-made global warming is one of the key factors contributing to the sixth mass extinction of species. The ocean has long taken the brunt of the impacts of climate change and has been influenced by the raise in temperature and the associated marine water acidification. These processes are gradually altering the ocean's unique landscapes and biodiversity.

Marine life, from unicellular microorganisms to mammals, is struggling to adapt to new environments and change their distribution and ecological niches. Some of these species are going extinct, while others manage to find rescue and stay alive. Environmental changes and ecosystem destruction have a substantial effect on Earth. However, they also provide exciting opportunities to understand the origin and the evolution of life using elaborate modern methods for observations and outstanding data analysis capabilities.

BMC Genomics is calling for submissions to our Second dive into marine genomics for early-career researchers Collection (marine biologists, marine ecologists, and evolutionary biologists) on their first step in understanding the world ocean's biodiversity during this era of substantial changes using molecular genetics, genomics, and bioinformatics methods. For this Collection, we invite you to contribute original research papers describing the application of modern methods for phylogenetic analyses, as well as speciation and molecular evolution studies of marine species in changing environments. Experimental studies demonstrating the importance of epigenetic factors (i.e. non-coding RNAs and RNA/DNA modifications) in adaptation to changing environments and research focused on describing the role of interspecific hybridization and its adaptive potential are also welcome. With this collection we would like to promote the sustainable development goal SDG 14: Life Below Water.

N.B. As we understand the importance of the first steps for marine genomics, for this collection BMC Genomics would like to encourage manuscripts where the first author is an early-career researcher (BSc, MSc, or PhD student or scientist with no more than 5 years of research experience after the PhD). As per our policy, APC waivers are available for corresponding authors based in countries listed here: apc waivers | Open research | Springer Nature.

Image credit: © Anastasiia Samoukina

There are currently no articles in this collection.

Submission Guidelines

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This Collection welcomes submission of original Research Articles. Should you wish to submit a different article type, please read our submission guidelines to confirm that type is accepted by the journal. Articles for this Collection should be submitted via our submission system, Snapp. During the submission process you will be asked whether you are submitting to a Collection, please select "Second dive into marine genomics" from the dropdown menu.

Articles will undergo the journal’s standard peer-review process and are subject to all of the journal’s standard policies. Articles will be added to the Collection as they are published.

The Editors have no competing interests with the submissions which they handle through the peer review process. The peer review of any submissions for which the Editors have competing interests is handled by another Editorial Board Member who has no competing interests.